It won't tear up the output shaft, it'll mess up the transmission input shaft bearing retainer. In these cars, there is a collar that goes over the input shaft that the bearing slides back and forth on. This collar also serves as the retainer for the main big bearing for the input shaft. If the bearing gets torn up (hence pulsating in the pedal), then it can gouge up the collar that the bearing slides on. Since the bearing retainer is aluminum, it can get gouged up pretty easy by a torn up bearing rotating at engine speed.
Like I told you on the other forum, another concern is that it will tear up the throwout bearing release fork, but that's a cheap part so it's not a big deal. I don't know how much the throwout bearing retainer costs, because the guy I had do my clutch had a used one that was in excellent shape laying around. I think he charged me like 20 bucks for it. He gave me the choice of the used one or a new one, but he was going to have to go through the BMW dealer for a new one. The part just looks like it could possibly be an expensive part.
Be prepared, the clutch operation is only going to go downhill majorly from here.